Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
CEACAM3P40198 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 DUX4L27-201ENST00000554796 1261 ntBASIC12.91□□□□□ -0.34
CEACAM3P40198 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.91□□□□□ -0.34
CEACAM3P40198 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 AC138649.4-201ENST00000612222 287 ntBASIC12.91□□□□□ -0.34
CEACAM3P40198 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.91□□□□□ -0.34
CEACAM3P40198 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CEACAM3P40198 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CEACAM3P40198 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.91□□□□□ -0.34
CEACAM3P40198 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.91□□□□□ -0.34
CEACAM3P40198 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.91□□□□□ -0.34
CEACAM3P40198 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CEACAM3P40198 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.91□□□□□ -0.34
CEACAM3P40198 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CEACAM3P40198 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.9□□□□□ -0.34
CEACAM3P40198 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.9□□□□□ -0.34
CEACAM3P40198 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.9□□□□□ -0.34
CEACAM3P40198 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.9□□□□□ -0.34
CEACAM3P40198 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CEACAM3P40198 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.9□□□□□ -0.34
CEACAM3P40198 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.9□□□□□ -0.34
CEACAM3P40198 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CEACAM3P40198 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.9□□□□□ -0.34
CEACAM3P40198 CYMP-203ENST00000474680 1263 ntBASIC12.9□□□□□ -0.34
CEACAM3P40198 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.9□□□□□ -0.34
CEACAM3P40198 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.9□□□□□ -0.34
CEACAM3P40198 AL390754.1-201ENST00000619088 582 ntBASIC12.9□□□□□ -0.34
CEACAM3P40198 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CEACAM3P40198 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.9□□□□□ -0.34
CEACAM3P40198 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.9□□□□□ -0.34
CEACAM3P40198 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.9□□□□□ -0.34
CEACAM3P40198 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
CEACAM3P40198 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CEACAM3P40198 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CEACAM3P40198 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CEACAM3P40198 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.9□□□□□ -0.35
CEACAM3P40198 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.89□□□□□ -0.35
CEACAM3P40198 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.89□□□□□ -0.35
CEACAM3P40198 AC100757.3-201ENST00000622361 1406 ntBASIC12.89□□□□□ -0.35
CEACAM3P40198 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 AL365203.3-201ENST00000609742 2057 ntBASIC12.89□□□□□ -0.35
CEACAM3P40198 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CEACAM3P40198 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.89□□□□□ -0.35
CEACAM3P40198 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.89□□□□□ -0.35
CEACAM3P40198 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CEACAM3P40198 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.89□□□□□ -0.35
CEACAM3P40198 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 AC093214.1-201ENST00000511688 1107 ntBASIC12.89□□□□□ -0.35
CEACAM3P40198 SDHAP3-202ENST00000515467 728 ntBASIC12.89□□□□□ -0.35
CEACAM3P40198 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CEACAM3P40198 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms