Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PDE6BP35913 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6BP35913 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6BP35913 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6BP35913 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6BP35913 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6BP35913 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 MAGEA5-201ENST00000446757 942 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6BP35913 RPS2P36-201ENST00000456516 831 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.17■□□□□ 0.66
PDE6BP35913 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 AC025181.2-201ENST00000606994 802 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
PDE6BP35913 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6BP35913 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PDE6BP35913 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.17■□□□□ 0.66
PDE6BP35913 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6BP35913 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6BP35913 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.16■□□□□ 0.66
PDE6BP35913 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.16■□□□□ 0.66
PDE6BP35913 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.16■□□□□ 0.66
PDE6BP35913 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.16■□□□□ 0.66
PDE6BP35913 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.16■□□□□ 0.66
PDE6BP35913 SPTLC1P5-201ENST00000450718 252 ntBASIC19.16■□□□□ 0.66
PDE6BP35913 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.16■□□□□ 0.66
PDE6BP35913 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.16■□□□□ 0.66
PDE6BP35913 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.16■□□□□ 0.66
PDE6BP35913 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.16■□□□□ 0.66
PDE6BP35913 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PDE6BP35913 PPY2P-201ENST00000582808 702 ntBASIC19.16■□□□□ 0.66
PDE6BP35913 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.16■□□□□ 0.66
PDE6BP35913 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDE6BP35913 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDE6BP35913 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6BP35913 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDE6BP35913 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDE6BP35913 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6BP35913 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6BP35913 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6BP35913 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms