Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 HLA-H-201ENST00000383620 1096 ntBASIC15.57■□□□□ 0.08
VARSP26640 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.57■□□□□ 0.08
VARSP26640 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.57■□□□□ 0.08
VARSP26640 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC15.57■□□□□ 0.08
VARSP26640 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.57■□□□□ 0.08
VARSP26640 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.57■□□□□ 0.08
VARSP26640 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.57■□□□□ 0.08
VARSP26640 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.57■□□□□ 0.08
VARSP26640 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.56■□□□□ 0.08
VARSP26640 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 AC023908.3-201ENST00000564211 3047 ntBASIC15.56■□□□□ 0.08
VARSP26640 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
VARSP26640 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.56■□□□□ 0.08
VARSP26640 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.56■□□□□ 0.08
VARSP26640 AC093214.1-201ENST00000511688 1107 ntBASIC15.56■□□□□ 0.08
VARSP26640 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.56■□□□□ 0.08
VARSP26640 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VARSP26640 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.56■□□□□ 0.08
VARSP26640 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.56■□□□□ 0.08
VARSP26640 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
VARSP26640 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VARSP26640 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
VARSP26640 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VARSP26640 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.55■□□□□ 0.08
VARSP26640 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.55■□□□□ 0.08
VARSP26640 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VARSP26640 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VARSP26640 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VARSP26640 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms