Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2B1P20020 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 PHKG1P2-201ENST00000457537 863 ntBASIC18.2■□□□□ 0.5
ATP2B1P20020 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2B1P20020 AL512356.2-201ENST00000546955 174 ntBASIC18.2■□□□□ 0.5
ATP2B1P20020 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2B1P20020 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.2■□□□□ 0.5
ATP2B1P20020 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ATP2B1P20020 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2B1P20020 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 TUBB3P1-201ENST00000405796 1332 ntBASIC18.2■□□□□ 0.5
ATP2B1P20020 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATP2B1P20020 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B1P20020 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B1P20020 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AC025678.2-201ENST00000562061 970 ntBASIC18.19■□□□□ 0.5
ATP2B1P20020 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2B1P20020 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2B1P20020 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
ATP2B1P20020 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2B1P20020 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP2B1P20020 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ATP2B1P20020 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2B1P20020 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2B1P20020 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2B1P20020 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP2B1P20020 AL079307.3-201ENST00000556114 283 ntBASIC18.18■□□□□ 0.5
ATP2B1P20020 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP2B1P20020 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2B1P20020 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms