Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 TREML5P-201ENST00000421694 576 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 AC092580.3-201ENST00000430932 139 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 AC067863.1-201ENST00000494933 530 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 AC027369.6-201ENST00000525520 931 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.02■□□□□ 0.16
NFKB1P19838 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.02■□□□□ 0.16
NFKB1P19838 AL109954.1-202ENST00000564051 2148 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 AC006538.3-201ENST00000612495 578 ntBASIC16.02■□□□□ 0.16
NFKB1P19838 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NFKB1P19838 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.02■□□□□ 0.16
NFKB1P19838 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.02■□□□□ 0.15
NFKB1P19838 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.02■□□□□ 0.15
NFKB1P19838 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.02■□□□□ 0.15
NFKB1P19838 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.02■□□□□ 0.15
NFKB1P19838 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.02■□□□□ 0.15
NFKB1P19838 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.02■□□□□ 0.15
NFKB1P19838 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NFKB1P19838 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NFKB1P19838 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 AL645939.2-201ENST00000427340 991 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 RN7SL618P-201ENST00000477850 296 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.01■□□□□ 0.15
NFKB1P19838 AC010336.2-201ENST00000564226 506 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.01■□□□□ 0.15
NFKB1P19838 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.01■□□□□ 0.15
NFKB1P19838 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.01■□□□□ 0.15
NFKB1P19838 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.01■□□□□ 0.15
NFKB1P19838 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.01■□□□□ 0.15
NFKB1P19838 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 AP002414.2-201ENST00000591780 3365 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 NORAD-201ENST00000565493 5339 ntBASIC16.01■□□□□ 0.15
NFKB1P19838 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NFKB1P19838 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.01■□□□□ 0.15
NFKB1P19838 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NFKB1P19838 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16■□□□□ 0.15
NFKB1P19838 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16■□□□□ 0.15
NFKB1P19838 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
NFKB1P19838 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16■□□□□ 0.15
NFKB1P19838 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NFKB1P19838 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16■□□□□ 0.15
NFKB1P19838 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms