Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.92■□□□□ 0.3
CD58P19256 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CD58P19256 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
CD58P19256 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD58P19256 AC009090.5-201ENST00000624886 2285 ntBASIC16.91■□□□□ 0.3
CD58P19256 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 MRPS18AP1-201ENST00000414458 589 ntBASIC16.91■□□□□ 0.3
CD58P19256 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.91■□□□□ 0.3
CD58P19256 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.91■□□□□ 0.3
CD58P19256 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.91■□□□□ 0.3
CD58P19256 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 RNA5SP421-201ENST00000516864 134 ntBASIC16.91■□□□□ 0.3
CD58P19256 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.91■□□□□ 0.3
CD58P19256 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CD58P19256 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.91■□□□□ 0.3
CD58P19256 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD58P19256 AL596257.1-201ENST00000641463 2694 ntBASIC16.91■□□□□ 0.3
CD58P19256 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.91■□□□□ 0.3
CD58P19256 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
CD58P19256 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD58P19256 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 Z97205.2-201ENST00000564697 1639 ntBASIC16.9■□□□□ 0.3
CD58P19256 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CD58P19256 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.9■□□□□ 0.3
CD58P19256 KRT18P64-201ENST00000434946 1219 ntBASIC16.9■□□□□ 0.3
CD58P19256 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.9■□□□□ 0.3
CD58P19256 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.9■□□□□ 0.3
CD58P19256 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 AC074044.1-201ENST00000609673 707 ntBASIC16.9■□□□□ 0.3
CD58P19256 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.9■□□□□ 0.3
CD58P19256 AF228730.6-201ENST00000641497 218 ntBASIC16.9■□□□□ 0.3
CD58P19256 AC084121.3-201ENST00000641716 218 ntBASIC16.9■□□□□ 0.3
CD58P19256 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 AC073347.1-201ENST00000421633 2643 ntBASIC16.9■□□□□ 0.3
CD58P19256 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.9■□□□□ 0.3
CD58P19256 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.9■□□□□ 0.3
CD58P19256 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD58P19256 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD58P19256 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.89■□□□□ 0.3
CD58P19256 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms