Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF3P18847 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.27■■□□□ 1
ATF3P18847 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATF3P18847 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.27■■□□□ 1
ATF3P18847 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC21.27■■□□□ 1
ATF3P18847 AC068587.8-201ENST00000641239 219 ntBASIC21.27■■□□□ 1
ATF3P18847 AL805961.1-201ENST00000642026 753 ntBASIC21.27■■□□□ 1
ATF3P18847 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATF3P18847 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ATF3P18847 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ATF3P18847 AC068880.1-201ENST00000507289 2297 ntBASIC21.27■■□□□ 1
ATF3P18847 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATF3P18847 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.27■■□□□ 1
ATF3P18847 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.27■□□□□ 0.99
ATF3P18847 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATF3P18847 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATF3P18847 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.27■□□□□ 0.99
ATF3P18847 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.26■□□□□ 0.99
ATF3P18847 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATF3P18847 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATF3P18847 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATF3P18847 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.26■□□□□ 0.99
ATF3P18847 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.26■□□□□ 0.99
ATF3P18847 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATF3P18847 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.26■□□□□ 0.99
ATF3P18847 AL136295.7-201ENST00000619226 1200 ntBASIC21.26■□□□□ 0.99
ATF3P18847 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATF3P18847 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
ATF3P18847 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATF3P18847 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC21.26■□□□□ 0.99
ATF3P18847 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.25■□□□□ 0.99
ATF3P18847 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.25■□□□□ 0.99
ATF3P18847 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC21.25■□□□□ 0.99
ATF3P18847 KRT18P66-201ENST00000452970 1269 ntBASIC21.25■□□□□ 0.99
ATF3P18847 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 AC087045.2-201ENST00000606279 1003 ntBASIC21.25■□□□□ 0.99
ATF3P18847 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 AL158070.2-201ENST00000623713 1621 ntBASIC21.25■□□□□ 0.99
ATF3P18847 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATF3P18847 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATF3P18847 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATF3P18847 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ATF3P18847 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
ATF3P18847 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 AC007787.1-201ENST00000588095 1583 ntBASIC21.24■□□□□ 0.99
ATF3P18847 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ATF3P18847 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC21.24■□□□□ 0.99
ATF3P18847 AL627389.1-201ENST00000413508 1182 ntBASIC21.24■□□□□ 0.99
ATF3P18847 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21.24■□□□□ 0.99
ATF3P18847 ISCA2P1-201ENST00000425548 448 ntBASIC21.24■□□□□ 0.99
ATF3P18847 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 GHSR-202ENST00000427970 912 ntBASIC21.24■□□□□ 0.99
ATF3P18847 PUDPP3-201ENST00000445368 636 ntBASIC21.24■□□□□ 0.99
ATF3P18847 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 AC004066.1-201ENST00000502488 802 ntBASIC21.24■□□□□ 0.99
ATF3P18847 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 AC242376.1-201ENST00000559033 726 ntBASIC21.24■□□□□ 0.99
ATF3P18847 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATF3P18847 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 AP001065.2-201ENST00000617205 644 ntBASIC21.24■□□□□ 0.99
ATF3P18847 AC009084.3-201ENST00000623356 437 ntBASIC21.24■□□□□ 0.99
ATF3P18847 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.24■□□□□ 0.99
ATF3P18847 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms