Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPRFP10586 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 AL596087.1-201ENST00000400979 1969 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 RN7SL769P-201ENST00000469386 295 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PTPRFP10586 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPRFP10586 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 AD000864.1-201ENST00000624076 2295 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 KRT8P4-201ENST00000509735 1454 ntBASIC17.67■□□□□ 0.42
PTPRFP10586 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPRFP10586 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRFP10586 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 AC091046.1-201ENST00000331871 207 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 RN7SL11P-201ENST00000471305 293 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPRFP10586 FTLP10-202ENST00000505798 471 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 AL160314.3-201ENST00000556041 767 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 CHMP1AP1-201ENST00000445563 662 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPRFP10586 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 MIR4683-201ENST00000579659 81 ntBASIC17.66■□□□□ 0.42
PTPRFP10586 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRFP10586 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPRFP10586 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRFP10586 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRFP10586 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRFP10586 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRFP10586 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPRFP10586 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRFP10586 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRFP10586 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRFP10586 FTLP1-201ENST00000449155 526 ntBASIC17.65■□□□□ 0.42
PTPRFP10586 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRFP10586 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRFP10586 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.65■□□□□ 0.42
PTPRFP10586 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PTPRFP10586 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRFP10586 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRFP10586 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRFP10586 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms