Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 AC136621.1-201ENST00000624017 2304 ntBASIC11.83□□□□□ -0.52
SMIM17P0DL12 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 AL109954.1-202ENST00000564051 2148 ntBASIC11.83□□□□□ -0.52
SMIM17P0DL12 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.83□□□□□ -0.52
SMIM17P0DL12 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM17P0DL12 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.82□□□□□ -0.52
SMIM17P0DL12 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 HAUS4P1-201ENST00000406739 1145 ntBASIC11.82□□□□□ -0.52
SMIM17P0DL12 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 LINC01711-201ENST00000598340 967 ntBASIC11.82□□□□□ -0.52
SMIM17P0DL12 AC021097.1-201ENST00000607902 574 ntBASIC11.82□□□□□ -0.52
SMIM17P0DL12 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 AC092919.2-201ENST00000623631 1645 ntBASIC11.82□□□□□ -0.52
SMIM17P0DL12 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM17P0DL12 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM17P0DL12 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 AC106881.1-201ENST00000605849 3329 ntBASIC11.81□□□□□ -0.52
SMIM17P0DL12 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 AC010327.5-201ENST00000586923 3061 ntBASIC11.81□□□□□ -0.52
SMIM17P0DL12 AC090114.2-201ENST00000608477 7054 ntBASIC11.81□□□□□ -0.52
SMIM17P0DL12 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 AC087481.3-201ENST00000602886 1894 ntBASIC11.81□□□□□ -0.52
SMIM17P0DL12 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM17P0DL12 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 TMBIM7P-203ENST00000641617 1718 ntBASIC11.81□□□□□ -0.52
SMIM17P0DL12 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM17P0DL12 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms