Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLTAP09496 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 AC144831.1-201ENST00000573312 2656 ntBASIC17.27■□□□□ 0.35
CLTAP09496 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLTAP09496 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLTAP09496 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLTAP09496 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLTAP09496 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.27■□□□□ 0.35
CLTAP09496 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLTAP09496 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 SPDYE18-201ENST00000510091 1050 ntBASIC17.26■□□□□ 0.35
CLTAP09496 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.26■□□□□ 0.35
CLTAP09496 HNRNPUP1-201ENST00000554987 333 ntBASIC17.26■□□□□ 0.35
CLTAP09496 AC092337.1-201ENST00000568699 1129 ntBASIC17.26■□□□□ 0.35
CLTAP09496 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.26■□□□□ 0.35
CLTAP09496 SRD5A3P1-201ENST00000603021 949 ntBASIC17.26■□□□□ 0.35
CLTAP09496 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.26■□□□□ 0.35
CLTAP09496 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLTAP09496 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLTAP09496 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.26■□□□□ 0.35
CLTAP09496 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.26■□□□□ 0.35
CLTAP09496 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLTAP09496 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CLTAP09496 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLTAP09496 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLTAP09496 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
CLTAP09496 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLTAP09496 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.25■□□□□ 0.35
CLTAP09496 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLTAP09496 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLTAP09496 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CLTAP09496 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.25■□□□□ 0.35
CLTAP09496 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 DOC2GP-202ENST00000514950 1163 ntBASIC17.25■□□□□ 0.35
CLTAP09496 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 AC097359.3-201ENST00000603982 1210 ntBASIC17.25■□□□□ 0.35
CLTAP09496 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.25■□□□□ 0.35
CLTAP09496 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLTAP09496 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLTAP09496 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms