Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 AC138969.2-201ENST00000532739 9932 ntBASIC13.78□□□□□ -0.2
SFTPBP07988 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.78□□□□□ -0.2
SFTPBP07988 AC254562.1-201ENST00000417586 456 ntBASIC13.78□□□□□ -0.2
SFTPBP07988 ACTG1P14-201ENST00000446382 1122 ntBASIC13.78□□□□□ -0.2
SFTPBP07988 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SFTPBP07988 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.78□□□□□ -0.2
SFTPBP07988 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.78□□□□□ -0.2
SFTPBP07988 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.78□□□□□ -0.2
SFTPBP07988 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.78□□□□□ -0.2
SFTPBP07988 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.78□□□□□ -0.2
SFTPBP07988 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SFTPBP07988 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.78□□□□□ -0.2
SFTPBP07988 WASH6P-202ENST00000359512 1437 ntBASIC13.78□□□□□ -0.2
SFTPBP07988 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SFTPBP07988 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SFTPBP07988 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.78□□□□□ -0.2
SFTPBP07988 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.78□□□□□ -0.2
SFTPBP07988 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
SFTPBP07988 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SFTPBP07988 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SFTPBP07988 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SFTPBP07988 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SFTPBP07988 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.77□□□□□ -0.21
SFTPBP07988 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.77□□□□□ -0.21
SFTPBP07988 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.77□□□□□ -0.21
SFTPBP07988 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.77□□□□□ -0.21
SFTPBP07988 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.77□□□□□ -0.21
SFTPBP07988 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SFTPBP07988 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.77□□□□□ -0.21
SFTPBP07988 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.77□□□□□ -0.21
SFTPBP07988 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.77□□□□□ -0.21
SFTPBP07988 AC099522.2-201ENST00000607001 744 ntBASIC13.77□□□□□ -0.21
SFTPBP07988 AL365330.1-201ENST00000607459 531 ntBASIC13.77□□□□□ -0.21
SFTPBP07988 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
SFTPBP07988 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.77□□□□□ -0.21
SFTPBP07988 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 AC067750.1-201ENST00000608826 6545 ntBASIC13.77□□□□□ -0.21
SFTPBP07988 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SFTPBP07988 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.77□□□□□ -0.21
SFTPBP07988 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SFTPBP07988 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SFTPBP07988 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms