Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DPB1P04440 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 AP001282.1-201ENST00000531301 1499 ntBASIC14.23□□□□□ -0.13
HLA-DPB1P04440 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 LINC00552-201ENST00000625151 2579 ntBASIC14.23□□□□□ -0.13
HLA-DPB1P04440 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DPB1P04440 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AC126365.1-201ENST00000578585 1514 ntBASIC14.22□□□□□ -0.13
HLA-DPB1P04440 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms