Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.16■□□□□ 0.34
VTNP04004 AC134312.5-201ENST00000568031 1313 ntBASIC17.16■□□□□ 0.34
VTNP04004 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
VTNP04004 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTNP04004 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTNP04004 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VTNP04004 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VTNP04004 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VTNP04004 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.16■□□□□ 0.34
VTNP04004 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VTNP04004 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VTNP04004 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 AC012441.1-201ENST00000446669 685 ntBASIC17.15■□□□□ 0.34
VTNP04004 AL355864.2-201ENST00000447420 863 ntBASIC17.15■□□□□ 0.34
VTNP04004 BNIP3P42-201ENST00000454982 569 ntBASIC17.15■□□□□ 0.34
VTNP04004 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.15■□□□□ 0.34
VTNP04004 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 AC106760.1-201ENST00000508690 800 ntBASIC17.15■□□□□ 0.34
VTNP04004 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.15■□□□□ 0.34
VTNP04004 BNIP3P29-201ENST00000598302 571 ntBASIC17.15■□□□□ 0.34
VTNP04004 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 AC011447.5-201ENST00000616168 564 ntBASIC17.15■□□□□ 0.34
VTNP04004 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VTNP04004 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.15■□□□□ 0.34
VTNP04004 PRAL-201ENST00000624952 3286 ntBASIC17.15■□□□□ 0.34
VTNP04004 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VTNP04004 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
VTNP04004 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
VTNP04004 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VTNP04004 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.14■□□□□ 0.34
VTNP04004 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VTNP04004 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.14■□□□□ 0.33
VTNP04004 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VTNP04004 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 AL139384.1-201ENST00000612143 3047 ntBASIC17.14■□□□□ 0.33
VTNP04004 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.14■□□□□ 0.33
VTNP04004 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 HLA-V-201ENST00000429037 534 ntBASIC17.14■□□□□ 0.33
VTNP04004 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.14■□□□□ 0.33
VTNP04004 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.14■□□□□ 0.33
VTNP04004 KLF2P4-201ENST00000451959 1225 ntBASIC17.14■□□□□ 0.33
VTNP04004 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.14■□□□□ 0.33
VTNP04004 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.14■□□□□ 0.33
VTNP04004 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.14■□□□□ 0.33
VTNP04004 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 AC093813.1-201ENST00000605066 256 ntBASIC17.14■□□□□ 0.33
VTNP04004 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.14■□□□□ 0.33
VTNP04004 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 AC093525.8-201ENST00000624099 1342 ntBASIC17.14■□□□□ 0.33
VTNP04004 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.14■□□□□ 0.33
VTNP04004 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VTNP04004 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms