Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 AC141586.5-201ENST00000624546 2050 ntBASIC17.7■□□□□ 0.42
ALDH1A1P00352 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALDH1A1P00352 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.7■□□□□ 0.42
ALDH1A1P00352 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 RNMTL1P1-201ENST00000454103 560 ntBASIC17.69■□□□□ 0.42
ALDH1A1P00352 CEP164P1-201ENST00000455142 418 ntBASIC17.69■□□□□ 0.42
ALDH1A1P00352 AC125604.1-201ENST00000496255 707 ntBASIC17.69■□□□□ 0.42
ALDH1A1P00352 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 AC012044.1-201ENST00000603431 297 ntBASIC17.69■□□□□ 0.42
ALDH1A1P00352 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ALDH1A1P00352 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALDH1A1P00352 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 RPSAP31-201ENST00000416648 895 ntBASIC17.68■□□□□ 0.42
ALDH1A1P00352 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 FGFR3P1-201ENST00000449999 601 ntBASIC17.68■□□□□ 0.42
ALDH1A1P00352 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 AC004066.1-201ENST00000502488 802 ntBASIC17.68■□□□□ 0.42
ALDH1A1P00352 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.68■□□□□ 0.42
ALDH1A1P00352 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ALDH1A1P00352 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALDH1A1P00352 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC004899.1-201ENST00000424687 1714 ntBASIC17.67■□□□□ 0.42
ALDH1A1P00352 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms