Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC068880.1-201ENST00000507289 2297 ntBASIC15.07■□□□□ 0
GFRA3O60609 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 AC148477.4-201ENST00000613430 1793 ntBASIC15.07■□□□□ 0
GFRA3O60609 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 AC136604.1-201ENST00000418535 575 ntBASIC15.07■□□□□ 0
GFRA3O60609 PSAT1P2-201ENST00000426107 972 ntBASIC15.07■□□□□ 0
GFRA3O60609 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 RN7SL258P-201ENST00000478664 300 ntBASIC15.07■□□□□ 0
GFRA3O60609 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC15.07■□□□□ 0
GFRA3O60609 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.07■□□□□ 0
GFRA3O60609 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.07■□□□□ 0
GFRA3O60609 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 AC087392.5-201ENST00000612517 489 ntBASIC15.07■□□□□ 0
GFRA3O60609 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.07■□□□□ 0
GFRA3O60609 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.07■□□□□ 0
GFRA3O60609 PCDHB18P-201ENST00000524813 2368 ntBASIC15.07■□□□□ 0
GFRA3O60609 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
GFRA3O60609 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.07■□□□□ 0
GFRA3O60609 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
GFRA3O60609 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.06■□□□□ 0
GFRA3O60609 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.06■□□□□ 0
GFRA3O60609 LYPLA2P1-203ENST00000447689 696 ntBASIC15.06■□□□□ 0
GFRA3O60609 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
GFRA3O60609 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.06■□□□□ 0
GFRA3O60609 AC005324.6-201ENST00000587972 613 ntBASIC15.06■□□□□ 0
GFRA3O60609 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.06■□□□□ 0
GFRA3O60609 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GFRA3O60609 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GFRA3O60609 PCDHB17P-201ENST00000539533 2393 ntBASIC15.05■□□□□ 0
GFRA3O60609 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.05■□□□□ -0
GFRA3O60609 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.05■□□□□ -0
GFRA3O60609 AL136309.1-201ENST00000403917 691 ntBASIC15.05■□□□□ -0
GFRA3O60609 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 AC004522.1-201ENST00000419978 654 ntBASIC15.05■□□□□ -0
GFRA3O60609 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.05■□□□□ -0
GFRA3O60609 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 AC008723.1-201ENST00000506922 207 ntBASIC15.05■□□□□ -0
GFRA3O60609 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.05■□□□□ -0
GFRA3O60609 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
GFRA3O60609 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GFRA3O60609 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 LINC02012-201ENST00000608206 1725 ntBASIC15.05■□□□□ -0
GFRA3O60609 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GFRA3O60609 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.05■□□□□ -0
GFRA3O60609 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms