Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 AC018665.1-201ENST00000622927 1362 ntBASIC17.7■□□□□ 0.42
SORBS3O60504 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.7■□□□□ 0.42
SORBS3O60504 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.7■□□□□ 0.42
SORBS3O60504 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.7■□□□□ 0.42
SORBS3O60504 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 ANKRD19P-201ENST00000338192 862 ntBASIC17.7■□□□□ 0.42
SORBS3O60504 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.7■□□□□ 0.42
SORBS3O60504 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.7■□□□□ 0.42
SORBS3O60504 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SORBS3O60504 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.7■□□□□ 0.42
SORBS3O60504 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.7■□□□□ 0.42
SORBS3O60504 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SORBS3O60504 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.7■□□□□ 0.42
SORBS3O60504 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.7■□□□□ 0.42
SORBS3O60504 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.7■□□□□ 0.42
SORBS3O60504 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 AC026691.1-201ENST00000602502 2017 ntBASIC17.7■□□□□ 0.42
SORBS3O60504 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.7■□□□□ 0.42
SORBS3O60504 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SORBS3O60504 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SORBS3O60504 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 MSTO2P-201ENST00000314835 1709 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 AL121723.1-201ENST00000445194 1519 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 TOMM22P5-201ENST00000416399 439 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
SORBS3O60504 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 BRI3BPP1-201ENST00000594224 787 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SORBS3O60504 MIR6805-201ENST00000615055 62 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.69■□□□□ 0.42
SORBS3O60504 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.69■□□□□ 0.42
SORBS3O60504 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.69■□□□□ 0.42
SORBS3O60504 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SORBS3O60504 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 CYP2T1P-202ENST00000641596 2535 ntBASIC17.68■□□□□ 0.42
SORBS3O60504 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 AC046158.3-201ENST00000624947 2558 ntBASIC17.68■□□□□ 0.42
SORBS3O60504 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SORBS3O60504 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.68■□□□□ 0.42
SORBS3O60504 AC134915.1-201ENST00000426461 574 ntBASIC17.68■□□□□ 0.42
SORBS3O60504 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SORBS3O60504 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms