Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNF13O43567 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNF13O43567 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.41□□□□□ -0.1
RNF13O43567 AC069335.1-201ENST00000489972 472 ntBASIC14.41□□□□□ -0.1
RNF13O43567 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 MIR4469-201ENST00000583919 79 ntBASIC14.41□□□□□ -0.1
RNF13O43567 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.41□□□□□ -0.1
RNF13O43567 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF13O43567 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF13O43567 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF13O43567 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
RNF13O43567 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.41□□□□□ -0.1
RNF13O43567 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF13O43567 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF13O43567 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 AP3S2-216ENST00000617003 1561 ntBASIC14.4□□□□□ -0.1
RNF13O43567 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RNF13O43567 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
RNF13O43567 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF13O43567 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF13O43567 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF13O43567 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 AC022145.2-201ENST00000598203 171 ntBASIC14.4□□□□□ -0.1
RNF13O43567 AC026979.3-201ENST00000607315 403 ntBASIC14.4□□□□□ -0.1
RNF13O43567 AC055717.3-201ENST00000622967 595 ntBASIC14.4□□□□□ -0.1
RNF13O43567 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 AC105339.1-204ENST00000636249 355 ntBASIC14.4□□□□□ -0.1
RNF13O43567 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 CICP24-201ENST00000605464 2705 ntBASIC14.4□□□□□ -0.1
RNF13O43567 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RNF13O43567 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF13O43567 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF13O43567 BNIP3P1-202ENST00000550043 1585 ntBASIC14.39□□□□□ -0.11
RNF13O43567 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RNF13O43567 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF13O43567 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms