Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MIR574-201ENST00000385209 96 ntBASIC12.66□□□□□ -0.38
UPK2O00526 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK2O00526 AZGP1P1-201ENST00000411909 902 ntBASIC12.66□□□□□ -0.38
UPK2O00526 AL353705.2-201ENST00000428243 662 ntBASIC12.66□□□□□ -0.38
UPK2O00526 AC005237.2-201ENST00000434368 219 ntBASIC12.66□□□□□ -0.38
UPK2O00526 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.66□□□□□ -0.38
UPK2O00526 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
UPK2O00526 POLD2P1-201ENST00000511220 997 ntBASIC12.66□□□□□ -0.38
UPK2O00526 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.66□□□□□ -0.38
UPK2O00526 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.66□□□□□ -0.38
UPK2O00526 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK2O00526 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UPK2O00526 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK2O00526 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UPK2O00526 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK2O00526 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UPK2O00526 AC068418.2-201ENST00000577309 3703 ntBASIC12.66□□□□□ -0.38
UPK2O00526 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK2O00526 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK2O00526 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UPK2O00526 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK2O00526 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK2O00526 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK2O00526 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 AL607033.1-201ENST00000623900 1599 ntBASIC12.65□□□□□ -0.38
UPK2O00526 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 AC091951.1-201ENST00000512854 2465 ntBASIC12.65□□□□□ -0.38
UPK2O00526 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 ALG1L5P-201ENST00000482043 771 ntBASIC12.65□□□□□ -0.38
UPK2O00526 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.65□□□□□ -0.38
UPK2O00526 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.65□□□□□ -0.38
UPK2O00526 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 AC105339.1-204ENST00000636249 355 ntBASIC12.65□□□□□ -0.38
UPK2O00526 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UPK2O00526 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
UPK2O00526 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.65□□□□□ -0.38
UPK2O00526 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.65□□□□□ -0.38
UPK2O00526 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UPK2O00526 OR2I1P-209ENST00000641730 5365 ntBASIC12.65□□□□□ -0.39
UPK2O00526 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
UPK2O00526 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 ELL2P1-201ENST00000413990 1906 ntBASIC12.64□□□□□ -0.39
UPK2O00526 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms