Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 AC027139.1-201ENST00000565286 951 ntBASIC19.29■□□□□ 0.68
RGPD3A6NKT7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 LINC01815-202ENST00000641468 1409 ntBASIC19.29■□□□□ 0.68
RGPD3A6NKT7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 DDX39AP1-201ENST00000445147 1181 ntBASIC19.29■□□□□ 0.68
RGPD3A6NKT7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.29■□□□□ 0.68
RGPD3A6NKT7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 HIST2H2BA-201ENST00000412169 381 ntBASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AC006122.1-201ENST00000493323 440 ntBASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 AC006449.6-201ENST00000612330 2296 ntBASIC19.28■□□□□ 0.68
RGPD3A6NKT7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 KRT18P9-201ENST00000604826 1300 ntBASIC19.28■□□□□ 0.68
RGPD3A6NKT7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD3A6NKT7 LINC01165-201ENST00000445190 1623 ntBASIC19.28■□□□□ 0.68
RGPD3A6NKT7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC092638.2-201ENST00000441105 947 ntBASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 MIR3188-201ENST00000583494 85 ntBASIC19.27■□□□□ 0.68
RGPD3A6NKT7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC007613.1-201ENST00000572811 2597 ntBASIC19.27■□□□□ 0.68
RGPD3A6NKT7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 IL9RP3-201ENST00000442856 1674 ntBASIC19.27■□□□□ 0.68
RGPD3A6NKT7 AC006058.4-201ENST00000624016 1670 ntBASIC19.27■□□□□ 0.68
RGPD3A6NKT7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD3A6NKT7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 MIR4472-1-201ENST00000584349 80 ntBASIC19.27■□□□□ 0.67
RGPD3A6NKT7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC19.27■□□□□ 0.67
RGPD3A6NKT7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 RNA5SP359-201ENST00000364838 113 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms