Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HLA-V-204ENST00000476601 1289 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AP003680.1-201ENST00000598970 3660 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SSR4P1-203ENST00000599569 2260 ntBASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TCRBV4S1A1TA0A5B7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC023157.3-201ENST00000619086 2088 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TMBIM7P-203ENST00000641617 1718 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC245100.5-201ENST00000452108 331 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC105021.1-202ENST00000570572 669 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RN7SL828P-201ENST00000607615 303 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC008761.3-201ENST00000624803 892 ntBASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.71□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms