Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 KRT17P6-201ENST00000453795 1220 ntBASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 AC092647.4-201ENST00000457211 535 ntBASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 MIR4497-201ENST00000583208 89 ntBASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 AC089987.1-201ENST00000551654 2209 ntBASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM27A0A1W2PRY6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 DGCR9-201ENST00000609630 2415 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 MST1P2-201ENST00000457982 2291 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 GPX1P2-201ENST00000429271 606 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AC139887.3-201ENST00000568585 713 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 MIR3909-201ENST00000579518 119 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AL805961.1-202ENST00000641562 540 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 AP001267.2-201ENST00000532619 2086 ntBASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.78□□□□□ -0.52
SMIM27A0A1W2PRY6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms