Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
YIPF1Q9Y548 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.62■■□□□ 1.53
YIPF1Q9Y548 SNX5-217ENST00000606557 1087 ntBASIC24.62■■□□□ 1.53
YIPF1Q9Y548 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 AL356740.2-201ENST00000601559 647 ntBASIC24.61■■□□□ 1.53
YIPF1Q9Y548 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
YIPF1Q9Y548 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.6■■□□□ 1.53
YIPF1Q9Y548 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.6■■□□□ 1.53
YIPF1Q9Y548 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.6■■□□□ 1.53
YIPF1Q9Y548 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
YIPF1Q9Y548 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
YIPF1Q9Y548 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.59■■□□□ 1.53
YIPF1Q9Y548 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 AL136116.3-201ENST00000402907 1138 ntBASIC24.58■■□□□ 1.53
YIPF1Q9Y548 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
YIPF1Q9Y548 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
YIPF1Q9Y548 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
YIPF1Q9Y548 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
YIPF1Q9Y548 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
YIPF1Q9Y548 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 DUSP8P4-201ENST00000399538 1761 ntBASIC24.53■■□□□ 1.52
YIPF1Q9Y548 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 AL512631.2-201ENST00000604634 923 ntBASIC24.53■■□□□ 1.52
YIPF1Q9Y548 MIR4466-201ENST00000606121 54 ntBASIC24.53■■□□□ 1.52
YIPF1Q9Y548 MIR6722-201ENST00000617286 78 ntBASIC24.53■■□□□ 1.52
YIPF1Q9Y548 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
YIPF1Q9Y548 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
YIPF1Q9Y548 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
YIPF1Q9Y548 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
YIPF1Q9Y548 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
YIPF1Q9Y548 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
YIPF1Q9Y548 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
YIPF1Q9Y548 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
YIPF1Q9Y548 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms