Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COMMD3Q9UBI1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD3Q9UBI1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD3Q9UBI1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.43■□□□□ 0.86
COMMD3Q9UBI1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3Q9UBI1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3Q9UBI1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD3Q9UBI1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3Q9UBI1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3Q9UBI1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 MIR3665-201ENST00000578708 105 ntBASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3Q9UBI1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 AL359258.2-201ENST00000564063 1566 ntBASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3Q9UBI1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3Q9UBI1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.35■□□□□ 0.85
COMMD3Q9UBI1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms