Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCDNQ9UBB6 AL137784.2-201ENST00000607332 1000 ntBASIC23.32■■□□□ 1.32
NCDNQ9UBB6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NCDNQ9UBB6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCDNQ9UBB6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NCDNQ9UBB6 RASA4CP-201ENST00000424092 1398 ntBASIC23.31■■□□□ 1.32
NCDNQ9UBB6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.31■■□□□ 1.32
NCDNQ9UBB6 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.31■■□□□ 1.32
NCDNQ9UBB6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.31■■□□□ 1.32
NCDNQ9UBB6 AL449106.1-201ENST00000608517 1980 ntBASIC23.31■■□□□ 1.32
NCDNQ9UBB6 IRS3P-201ENST00000223076 1006 ntBASIC23.3■■□□□ 1.32
NCDNQ9UBB6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.3■■□□□ 1.32
NCDNQ9UBB6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NCDNQ9UBB6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NCDNQ9UBB6 MIR4767-201ENST00000582827 78 ntBASIC23.29■■□□□ 1.32
NCDNQ9UBB6 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.29■■□□□ 1.32
NCDNQ9UBB6 SYT6-210ENST00000641643 1587 ntBASIC23.28■■□□□ 1.32
NCDNQ9UBB6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCDNQ9UBB6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCDNQ9UBB6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCDNQ9UBB6 IKBKGP1-201ENST00000612193 1073 ntBASIC23.27■■□□□ 1.32
NCDNQ9UBB6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NCDNQ9UBB6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCDNQ9UBB6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NCDNQ9UBB6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
NCDNQ9UBB6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
NCDNQ9UBB6 BX255925.1-201ENST00000566954 1854 ntBASIC23.26■■□□□ 1.31
NCDNQ9UBB6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.26■■□□□ 1.31
NCDNQ9UBB6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.26■■□□□ 1.31
NCDNQ9UBB6 AC027682.1-201ENST00000562846 899 ntBASIC23.26■■□□□ 1.31
NCDNQ9UBB6 AC092171.4-201ENST00000609130 632 ntBASIC23.26■■□□□ 1.31
NCDNQ9UBB6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCDNQ9UBB6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCDNQ9UBB6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.25■■□□□ 1.31
NCDNQ9UBB6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.24■■□□□ 1.31
NCDNQ9UBB6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
NCDNQ9UBB6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NCDNQ9UBB6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCDNQ9UBB6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCDNQ9UBB6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCDNQ9UBB6 AC022517.1-201ENST00000592429 346 ntBASIC23.22■■□□□ 1.31
NCDNQ9UBB6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NCDNQ9UBB6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NCDNQ9UBB6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
NCDNQ9UBB6 AC034268.1-201ENST00000441047 882 ntBASIC23.2■■□□□ 1.3
NCDNQ9UBB6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.2■■□□□ 1.3
NCDNQ9UBB6 AC008764.7-201ENST00000593779 1081 ntBASIC23.2■■□□□ 1.3
NCDNQ9UBB6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.2■■□□□ 1.3
NCDNQ9UBB6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NCDNQ9UBB6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
NCDNQ9UBB6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms