Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
MRPL39Q9NYK5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MRPL39Q9NYK5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 ABHD17AP5-201ENST00000580133 923 ntBASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 AP003733.4-201ENST00000623785 1697 ntBASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MRPL39Q9NYK5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
MRPL39Q9NYK5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MRPL39Q9NYK5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.22■□□□□ 0.99
MRPL39Q9NYK5 AC133561.1-201ENST00000568600 2415 ntBASIC21.22■□□□□ 0.99
MRPL39Q9NYK5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MRPL39Q9NYK5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 RPS2P7-201ENST00000447334 885 ntBASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 MIR6765-201ENST00000614092 87 ntBASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.21■□□□□ 0.99
MRPL39Q9NYK5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
MRPL39Q9NYK5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL39Q9NYK5 DUX4L9-201ENST00000449051 1259 ntBASIC21.2■□□□□ 0.98
MRPL39Q9NYK5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
MRPL39Q9NYK5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MRPL39Q9NYK5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.2■□□□□ 0.98
MRPL39Q9NYK5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 AC129492.7-201ENST00000622992 756 ntBASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MRPL39Q9NYK5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 FOXO3B-201ENST00000395675 1928 ntBASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 KRT18P60-201ENST00000312876 1297 ntBASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.18■□□□□ 0.98
MRPL39Q9NYK5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 AC087393.1-201ENST00000582896 145 ntBASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 MIR6089-201ENST00000616698 64 ntBASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPL39Q9NYK5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 NTF6A-201ENST00000591175 560 ntBASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 AC079834.2-201ENST00000609776 1949 ntBASIC21.16■□□□□ 0.98
MRPL39Q9NYK5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 AL139125.2-201ENST00000623134 1869 ntBASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPL39Q9NYK5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
MRPL39Q9NYK5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MRPL39Q9NYK5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
MRPL39Q9NYK5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPL39Q9NYK5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPL39Q9NYK5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms