Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDLIM7Q9NR12 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDLIM7Q9NR12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDLIM7Q9NR12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDLIM7Q9NR12 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PDLIM7Q9NR12 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.41■■□□□ 1.82
PDLIM7Q9NR12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDLIM7Q9NR12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDLIM7Q9NR12 AC026271.2-201ENST00000428091 497 ntBASIC26.4■■□□□ 1.82
PDLIM7Q9NR12 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
PDLIM7Q9NR12 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.39■■□□□ 1.82
PDLIM7Q9NR12 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PDLIM7Q9NR12 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDLIM7Q9NR12 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 AC106739.1-201ENST00000617035 715 ntBASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 AC145676.1-201ENST00000514988 2004 ntBASIC26.38■■□□□ 1.81
PDLIM7Q9NR12 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PDLIM7Q9NR12 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 AC097639.1-201ENST00000565519 1891 ntBASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PDLIM7Q9NR12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 AC142381.2-201ENST00000566120 298 ntBASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.35■■□□□ 1.81
PDLIM7Q9NR12 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.34■■□□□ 1.81
PDLIM7Q9NR12 PBX2P1-201ENST00000493219 1291 ntBASIC26.34■■□□□ 1.81
PDLIM7Q9NR12 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.34■■□□□ 1.81
PDLIM7Q9NR12 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PDLIM7Q9NR12 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDLIM7Q9NR12 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.33■■□□□ 1.81
PDLIM7Q9NR12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.33■■□□□ 1.81
PDLIM7Q9NR12 AC011551.1-201ENST00000614101 683 ntBASIC26.33■■□□□ 1.81
PDLIM7Q9NR12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PDLIM7Q9NR12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PDLIM7Q9NR12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 AC104564.3-201ENST00000582367 638 ntBASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 AC135279.3-201ENST00000610945 1311 ntBASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PDLIM7Q9NR12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.3■■□□□ 1.8
PDLIM7Q9NR12 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.29■■□□□ 1.8
PDLIM7Q9NR12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms