Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZFYVE28Q9HCC9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.07■■□□□ 1.92
ZFYVE28Q9HCC9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ZFYVE28Q9HCC9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZFYVE28Q9HCC9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.06■■□□□ 1.92
ZFYVE28Q9HCC9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.06■■□□□ 1.92
ZFYVE28Q9HCC9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZFYVE28Q9HCC9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
ZFYVE28Q9HCC9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZFYVE28Q9HCC9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZFYVE28Q9HCC9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.04■■□□□ 1.92
ZFYVE28Q9HCC9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZFYVE28Q9HCC9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZFYVE28Q9HCC9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.03■■□□□ 1.92
ZFYVE28Q9HCC9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
ZFYVE28Q9HCC9 SYT6-210ENST00000641643 1587 ntBASIC27.03■■□□□ 1.92
ZFYVE28Q9HCC9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
ZFYVE28Q9HCC9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.02■■□□□ 1.92
ZFYVE28Q9HCC9 AC092171.4-201ENST00000609130 632 ntBASIC27.02■■□□□ 1.92
ZFYVE28Q9HCC9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
ZFYVE28Q9HCC9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
ZFYVE28Q9HCC9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.01■■□□□ 1.91
ZFYVE28Q9HCC9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZFYVE28Q9HCC9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 MIR4767-201ENST00000582827 78 ntBASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 CA15P2-201ENST00000611168 834 ntBASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
ZFYVE28Q9HCC9 RASA4CP-201ENST00000424092 1398 ntBASIC26.99■■□□□ 1.91
ZFYVE28Q9HCC9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZFYVE28Q9HCC9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZFYVE28Q9HCC9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZFYVE28Q9HCC9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZFYVE28Q9HCC9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.97■■□□□ 1.91
ZFYVE28Q9HCC9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
ZFYVE28Q9HCC9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZFYVE28Q9HCC9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZFYVE28Q9HCC9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.95■■□□□ 1.91
ZFYVE28Q9HCC9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
ZFYVE28Q9HCC9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZFYVE28Q9HCC9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZFYVE28Q9HCC9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.95■■□□□ 1.9
ZFYVE28Q9HCC9 AC005703.6-201ENST00000623265 1329 ntBASIC26.94■■□□□ 1.9
ZFYVE28Q9HCC9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.94■■□□□ 1.9
ZFYVE28Q9HCC9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZFYVE28Q9HCC9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 AC027682.1-201ENST00000562846 899 ntBASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.93■■□□□ 1.9
ZFYVE28Q9HCC9 IRS3P-201ENST00000223076 1006 ntBASIC26.92■■□□□ 1.9
ZFYVE28Q9HCC9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ZFYVE28Q9HCC9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZFYVE28Q9HCC9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZFYVE28Q9HCC9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.91■■□□□ 1.9
ZFYVE28Q9HCC9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZFYVE28Q9HCC9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZFYVE28Q9HCC9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZFYVE28Q9HCC9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.9■■□□□ 1.9
ZFYVE28Q9HCC9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms