Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PPP1R3EQ9H7J1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PPP1R3EQ9H7J1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP1R3EQ9H7J1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PPP1R3EQ9H7J1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPP1R3EQ9H7J1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3EQ9H7J1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP1R3EQ9H7J1 C9orf163-202ENST00000624034 2573 ntBASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 MIR3960-201ENST00000583311 91 ntBASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP1R3EQ9H7J1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.61■□□□□ 0.89
PPP1R3EQ9H7J1 SLC6A10P-202ENST00000431994 2058 ntBASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 AC093536.1-201ENST00000569153 554 ntBASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP1R3EQ9H7J1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 AC004812.2-201ENST00000611079 2094 ntBASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 RP9P-202ENST00000450133 1212 ntBASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 AC007029.1-201ENST00000604183 313 ntBASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PPP1R3EQ9H7J1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPP1R3EQ9H7J1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPP1R3EQ9H7J1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPP1R3EQ9H7J1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PPP1R3EQ9H7J1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
PPP1R3EQ9H7J1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 AL117328.2-201ENST00000624617 1940 ntBASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPP1R3EQ9H7J1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.56■□□□□ 0.88
PPP1R3EQ9H7J1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP1R3EQ9H7J1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.54■□□□□ 0.88
PPP1R3EQ9H7J1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms