Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHMP4BQ9H444 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHMP4BQ9H444 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CHMP4BQ9H444 AC004987.1-201ENST00000428627 508 ntBASIC29.43■■■□□ 2.3
CHMP4BQ9H444 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHMP4BQ9H444 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CHMP4BQ9H444 HLA-L-211ENST00000482052 1765 ntBASIC29.43■■■□□ 2.3
CHMP4BQ9H444 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.43■■■□□ 2.3
CHMP4BQ9H444 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHMP4BQ9H444 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 TSPY13P-201ENST00000338964 914 ntBASIC29.41■■■□□ 2.3
CHMP4BQ9H444 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHMP4BQ9H444 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 AC011551.1-201ENST00000614101 683 ntBASIC29.4■■■□□ 2.3
CHMP4BQ9H444 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHMP4BQ9H444 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.39■■■□□ 2.3
CHMP4BQ9H444 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CHMP4BQ9H444 BHLHE23-202ENST00000612929 1109 ntBASIC29.39■■■□□ 2.3
CHMP4BQ9H444 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
CHMP4BQ9H444 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.39■■■□□ 2.3
CHMP4BQ9H444 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHMP4BQ9H444 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CHMP4BQ9H444 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHMP4BQ9H444 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CHMP4BQ9H444 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHMP4BQ9H444 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CHMP4BQ9H444 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHMP4BQ9H444 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHMP4BQ9H444 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.37■■■□□ 2.29
CHMP4BQ9H444 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 AC012354.3-201ENST00000623734 483 ntBASIC29.36■■■□□ 2.29
CHMP4BQ9H444 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHMP4BQ9H444 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHMP4BQ9H444 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.35■■■□□ 2.29
CHMP4BQ9H444 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHMP4BQ9H444 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHMP4BQ9H444 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.35■■■□□ 2.29
CHMP4BQ9H444 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHMP4BQ9H444 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHMP4BQ9H444 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHMP4BQ9H444 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHMP4BQ9H444 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CHMP4BQ9H444 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHMP4BQ9H444 AL161729.1-201ENST00000604104 1402 ntBASIC29.31■■■□□ 2.28
CHMP4BQ9H444 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHMP4BQ9H444 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.31■■■□□ 2.28
CHMP4BQ9H444 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHMP4BQ9H444 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.31■■■□□ 2.28
CHMP4BQ9H444 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.31■■■□□ 2.28
CHMP4BQ9H444 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.31■■■□□ 2.28
CHMP4BQ9H444 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CHMP4BQ9H444 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.29■■■□□ 2.28
CHMP4BQ9H444 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms