Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC35.69■■■■□ 3.3
PTPN23Q9H3S7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC35.69■■■■□ 3.3
PTPN23Q9H3S7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC35.69■■■■□ 3.3
PTPN23Q9H3S7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
PTPN23Q9H3S7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC35.67■■■■□ 3.3
PTPN23Q9H3S7 CD72-202ENST00000378430 585 ntTSL 3 BASIC35.67■■■■□ 3.3
PTPN23Q9H3S7 AL512631.2-201ENST00000604634 923 ntBASIC35.67■■■■□ 3.3
PTPN23Q9H3S7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.67■■■■□ 3.3
PTPN23Q9H3S7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC35.66■■■■□ 3.3
PTPN23Q9H3S7 MIR6089-201ENST00000616698 64 ntBASIC35.66■■■■□ 3.3
PTPN23Q9H3S7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
PTPN23Q9H3S7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
PTPN23Q9H3S7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC35.65■■■■□ 3.3
PTPN23Q9H3S7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
PTPN23Q9H3S7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC35.65■■■■□ 3.3
PTPN23Q9H3S7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
PTPN23Q9H3S7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 AC091060.1-201ENST00000623524 1766 ntBASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC35.64■■■■□ 3.3
PTPN23Q9H3S7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC35.63■■■■□ 3.29
PTPN23Q9H3S7 AC008406.3-201ENST00000620001 1374 ntBASIC35.63■■■■□ 3.29
PTPN23Q9H3S7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
PTPN23Q9H3S7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC35.62■■■■□ 3.29
PTPN23Q9H3S7 SRR-208ENST00000576848 588 ntTSL 4 BASIC35.62■■■■□ 3.29
PTPN23Q9H3S7 MIR3621-201ENST00000580529 85 ntBASIC35.62■■■■□ 3.29
PTPN23Q9H3S7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PTPN23Q9H3S7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 AC019069.1-201ENST00000610008 1333 ntBASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC35.6■■■■□ 3.29
PTPN23Q9H3S7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC35.59■■■■□ 3.29
PTPN23Q9H3S7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PTPN23Q9H3S7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC35.59■■■■□ 3.29
PTPN23Q9H3S7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC35.59■■■■□ 3.29
PTPN23Q9H3S7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
PTPN23Q9H3S7 RASSF1-AS1-201ENST00000629828 790 ntBASIC35.58■■■■□ 3.29
PTPN23Q9H3S7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC35.57■■■■□ 3.29
PTPN23Q9H3S7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.29
PTPN23Q9H3S7 LBH-205ENST00000407930 756 ntTSL 2 BASIC35.57■■■■□ 3.29
PTPN23Q9H3S7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC35.57■■■■□ 3.29
PTPN23Q9H3S7 MIR4466-201ENST00000606121 54 ntBASIC35.57■■■■□ 3.28
PTPN23Q9H3S7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
PTPN23Q9H3S7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC35.56■■■■□ 3.28
PTPN23Q9H3S7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
PTPN23Q9H3S7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC35.55■■■■□ 3.28
PTPN23Q9H3S7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC35.55■■■■□ 3.28
PTPN23Q9H3S7 SLC6A10P-202ENST00000431994 2058 ntBASIC35.55■■■■□ 3.28
PTPN23Q9H3S7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.55■■■■□ 3.28
PTPN23Q9H3S7 AC145676.1-201ENST00000514988 2004 ntBASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC35.54■■■■□ 3.28
PTPN23Q9H3S7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
PTPN23Q9H3S7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
PTPN23Q9H3S7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
PTPN23Q9H3S7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC35.53■■■■□ 3.28
PTPN23Q9H3S7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC35.53■■■■□ 3.28
PTPN23Q9H3S7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
PTPN23Q9H3S7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC35.52■■■■□ 3.28
PTPN23Q9H3S7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC35.52■■■■□ 3.28
PTPN23Q9H3S7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC35.51■■■■□ 3.28
PTPN23Q9H3S7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
PTPN23Q9H3S7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
PTPN23Q9H3S7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.27
PTPN23Q9H3S7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 AC131274.2-201ENST00000580697 1507 ntBASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
PTPN23Q9H3S7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms