Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CXXC4Q9H2H0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 AC120024.1-201ENST00000562672 995 ntBASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CXXC4Q9H2H0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 MIR6724-1-201ENST00000616420 92 ntBASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 MIR6724-2-201ENST00000616483 92 ntBASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 MIR6724-4-201ENST00000617390 92 ntBASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 MIR6724-3-201ENST00000622482 92 ntBASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CXXC4Q9H2H0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CXXC4Q9H2H0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 AC026271.2-201ENST00000428091 497 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 AC104564.3-201ENST00000582367 638 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 AL356740.2-201ENST00000601559 647 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 MIR4466-201ENST00000606121 54 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 AC010997.5-201ENST00000609182 354 ntBASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CXXC4Q9H2H0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXXC4Q9H2H0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 AC097639.1-201ENST00000565519 1891 ntBASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.33■□□□□ 0.85
CXXC4Q9H2H0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CXXC4Q9H2H0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CXXC4Q9H2H0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CXXC4Q9H2H0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXXC4Q9H2H0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC4Q9H2H0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC4Q9H2H0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC4Q9H2H0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC4Q9H2H0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC4Q9H2H0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC4Q9H2H0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC4Q9H2H0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC4Q9H2H0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC4Q9H2H0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 MTDHP2-201ENST00000601468 714 ntBASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 AL512631.2-201ENST00000604634 923 ntBASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 MIR5787-201ENST00000611784 55 ntBASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 AC106739.1-201ENST00000617035 715 ntBASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC4Q9H2H0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC4Q9H2H0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC4Q9H2H0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms