Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
VPS11Q9H270 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 MIR639-201ENST00000384974 98 ntBASIC23.42■■□□□ 1.34
VPS11Q9H270 ECEL1P2-201ENST00000461596 1295 ntBASIC23.42■■□□□ 1.34
VPS11Q9H270 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.42■■□□□ 1.34
VPS11Q9H270 AC022413.1-201ENST00000624602 984 ntBASIC23.42■■□□□ 1.34
VPS11Q9H270 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
VPS11Q9H270 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS11Q9H270 RP9P-202ENST00000450133 1212 ntBASIC23.41■■□□□ 1.34
VPS11Q9H270 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VPS11Q9H270 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS11Q9H270 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS11Q9H270 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS11Q9H270 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
VPS11Q9H270 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS11Q9H270 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
VPS11Q9H270 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS11Q9H270 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
VPS11Q9H270 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.39■■□□□ 1.34
VPS11Q9H270 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.39■■□□□ 1.34
VPS11Q9H270 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
VPS11Q9H270 AC093536.1-201ENST00000569153 554 ntBASIC23.39■■□□□ 1.33
VPS11Q9H270 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
VPS11Q9H270 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS11Q9H270 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS11Q9H270 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS11Q9H270 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS11Q9H270 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.38■■□□□ 1.33
VPS11Q9H270 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS11Q9H270 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.38■■□□□ 1.33
VPS11Q9H270 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
VPS11Q9H270 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS11Q9H270 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS11Q9H270 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VPS11Q9H270 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.37■■□□□ 1.33
VPS11Q9H270 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS11Q9H270 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS11Q9H270 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS11Q9H270 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS11Q9H270 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.37■■□□□ 1.33
VPS11Q9H270 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS11Q9H270 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.36■■□□□ 1.33
VPS11Q9H270 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS11Q9H270 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS11Q9H270 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS11Q9H270 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
VPS11Q9H270 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS11Q9H270 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS11Q9H270 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS11Q9H270 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS11Q9H270 MIR6089-201ENST00000616698 64 ntBASIC23.35■■□□□ 1.33
VPS11Q9H270 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS11Q9H270 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS11Q9H270 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
VPS11Q9H270 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS11Q9H270 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS11Q9H270 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.34■■□□□ 1.33
VPS11Q9H270 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS11Q9H270 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
VPS11Q9H270 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS11Q9H270 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
VPS11Q9H270 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS11Q9H270 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS11Q9H270 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
VPS11Q9H270 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.33■■□□□ 1.32
VPS11Q9H270 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
VPS11Q9H270 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VPS11Q9H270 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS11Q9H270 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
VPS11Q9H270 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS11Q9H270 ABCB10P4-201ENST00000566803 2184 ntBASIC23.31■■□□□ 1.32
VPS11Q9H270 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS11Q9H270 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS11Q9H270 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS11Q9H270 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS11Q9H270 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS11Q9H270 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.31■■□□□ 1.32
VPS11Q9H270 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS11Q9H270 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS11Q9H270 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS11Q9H270 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS11Q9H270 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
VPS11Q9H270 AC007029.1-201ENST00000604183 313 ntBASIC23.3■■□□□ 1.32
VPS11Q9H270 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS11Q9H270 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
VPS11Q9H270 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS11Q9H270 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS11Q9H270 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms