Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VGLL1Q99990 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VGLL1Q99990 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.6■□□□□ 0.41
VGLL1Q99990 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VGLL1Q99990 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VGLL1Q99990 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VGLL1Q99990 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VGLL1Q99990 RP9P-202ENST00000450133 1212 ntBASIC17.59■□□□□ 0.41
VGLL1Q99990 ECEL1P2-201ENST00000461596 1295 ntBASIC17.59■□□□□ 0.41
VGLL1Q99990 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VGLL1Q99990 ABCB10P4-201ENST00000566803 2184 ntBASIC17.59■□□□□ 0.41
VGLL1Q99990 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VGLL1Q99990 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VGLL1Q99990 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VGLL1Q99990 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VGLL1Q99990 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.58■□□□□ 0.4
VGLL1Q99990 AC093536.1-201ENST00000569153 554 ntBASIC17.58■□□□□ 0.4
VGLL1Q99990 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VGLL1Q99990 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VGLL1Q99990 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.58■□□□□ 0.4
VGLL1Q99990 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.58■□□□□ 0.4
VGLL1Q99990 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VGLL1Q99990 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VGLL1Q99990 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VGLL1Q99990 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VGLL1Q99990 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VGLL1Q99990 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.57■□□□□ 0.4
VGLL1Q99990 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VGLL1Q99990 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 AC022413.1-201ENST00000624602 984 ntBASIC17.57■□□□□ 0.4
VGLL1Q99990 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
VGLL1Q99990 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VGLL1Q99990 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.56■□□□□ 0.4
VGLL1Q99990 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VGLL1Q99990 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VGLL1Q99990 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.56■□□□□ 0.4
VGLL1Q99990 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VGLL1Q99990 HLA-L-211ENST00000482052 1765 ntBASIC17.56■□□□□ 0.4
VGLL1Q99990 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VGLL1Q99990 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VGLL1Q99990 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.55■□□□□ 0.4
VGLL1Q99990 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 MIR639-201ENST00000384974 98 ntBASIC17.55■□□□□ 0.4
VGLL1Q99990 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.55■□□□□ 0.4
VGLL1Q99990 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.55■□□□□ 0.4
VGLL1Q99990 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VGLL1Q99990 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.54■□□□□ 0.4
VGLL1Q99990 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.54■□□□□ 0.4
VGLL1Q99990 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.54■□□□□ 0.4
VGLL1Q99990 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VGLL1Q99990 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.54■□□□□ 0.4
VGLL1Q99990 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VGLL1Q99990 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.54■□□□□ 0.4
VGLL1Q99990 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VGLL1Q99990 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VGLL1Q99990 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
VGLL1Q99990 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
VGLL1Q99990 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.53■□□□□ 0.4
VGLL1Q99990 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VGLL1Q99990 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
VGLL1Q99990 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.53■□□□□ 0.4
VGLL1Q99990 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.53■□□□□ 0.4
VGLL1Q99990 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.53■□□□□ 0.4
VGLL1Q99990 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.53■□□□□ 0.4
VGLL1Q99990 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.53■□□□□ 0.4
VGLL1Q99990 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL1Q99990 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.52■□□□□ 0.4
VGLL1Q99990 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VGLL1Q99990 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.52■□□□□ 0.4
VGLL1Q99990 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.52■□□□□ 0.4
VGLL1Q99990 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL1Q99990 AC068473.5-201ENST00000616428 2072 ntBASIC17.52■□□□□ 0.39
VGLL1Q99990 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.52■□□□□ 0.39
VGLL1Q99990 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL1Q99990 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL1Q99990 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms