Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL13Q99616 AC090877.2-201ENST00000558441 1738 ntBASIC19.56■□□□□ 0.72
CCL13Q99616 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL13Q99616 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL13Q99616 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCL13Q99616 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CCL13Q99616 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 KRT18P24-201ENST00000344739 1156 ntBASIC19.54■□□□□ 0.72
CCL13Q99616 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL13Q99616 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCL13Q99616 AL031848.2-201ENST00000607670 837 ntBASIC19.53■□□□□ 0.72
CCL13Q99616 MIR6089-201ENST00000616698 64 ntBASIC19.53■□□□□ 0.72
CCL13Q99616 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.53■□□□□ 0.72
CCL13Q99616 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCL13Q99616 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL13Q99616 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL13Q99616 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.53■□□□□ 0.72
CCL13Q99616 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.52■□□□□ 0.72
CCL13Q99616 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL13Q99616 AC011551.1-201ENST00000614101 683 ntBASIC19.52■□□□□ 0.72
CCL13Q99616 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCL13Q99616 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCL13Q99616 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL13Q99616 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL13Q99616 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL13Q99616 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.51■□□□□ 0.71
CCL13Q99616 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL13Q99616 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL13Q99616 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL13Q99616 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL13Q99616 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL13Q99616 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL13Q99616 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL13Q99616 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCL13Q99616 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CCL13Q99616 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
CCL13Q99616 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL13Q99616 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
CCL13Q99616 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL13Q99616 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL13Q99616 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL13Q99616 AP003733.4-201ENST00000623785 1697 ntBASIC19.49■□□□□ 0.71
CCL13Q99616 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL13Q99616 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL13Q99616 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL13Q99616 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL13Q99616 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CCL13Q99616 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL13Q99616 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL13Q99616 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCL13Q99616 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL13Q99616 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL13Q99616 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCL13Q99616 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.48■□□□□ 0.71
CCL13Q99616 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL13Q99616 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL13Q99616 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL13Q99616 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL13Q99616 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL13Q99616 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCL13Q99616 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL13Q99616 MIR4281-201ENST00000580852 62 ntBASIC19.46■□□□□ 0.71
CCL13Q99616 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL13Q99616 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL13Q99616 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL13Q99616 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL13Q99616 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCL13Q99616 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCL13Q99616 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.45■□□□□ 0.7
CCL13Q99616 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.45■□□□□ 0.7
CCL13Q99616 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 AL451085.2-201ENST00000605085 799 ntBASIC19.45■□□□□ 0.7
CCL13Q99616 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL13Q99616 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCL13Q99616 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL13Q99616 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCL13Q99616 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL13Q99616 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL13Q99616 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL13Q99616 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL13Q99616 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL13Q99616 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL13Q99616 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL13Q99616 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL13Q99616 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL13Q99616 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL13Q99616 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL13Q99616 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms