Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CASD1Q96PB1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CASD1Q96PB1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
CASD1Q96PB1 AC010501.1-201ENST00000606270 1962 ntBASIC25.25■■□□□ 1.63
CASD1Q96PB1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CASD1Q96PB1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.24■■□□□ 1.63
CASD1Q96PB1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.24■■□□□ 1.63
CASD1Q96PB1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASD1Q96PB1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.23■■□□□ 1.63
CASD1Q96PB1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASD1Q96PB1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CASD1Q96PB1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CASD1Q96PB1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 AC005837.3-201ENST00000612163 286 ntBASIC25.22■■□□□ 1.63
CASD1Q96PB1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CASD1Q96PB1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.22■■□□□ 1.63
CASD1Q96PB1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CASD1Q96PB1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.21■■□□□ 1.63
CASD1Q96PB1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CASD1Q96PB1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.2■■□□□ 1.63
CASD1Q96PB1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
CASD1Q96PB1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASD1Q96PB1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
CASD1Q96PB1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CASD1Q96PB1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CASD1Q96PB1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASD1Q96PB1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CASD1Q96PB1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.18■■□□□ 1.62
CASD1Q96PB1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.18■■□□□ 1.62
CASD1Q96PB1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASD1Q96PB1 AC133561.4-201ENST00000566112 224 ntBASIC25.18■■□□□ 1.62
CASD1Q96PB1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CASD1Q96PB1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.18■■□□□ 1.62
CASD1Q96PB1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.17■■□□□ 1.62
CASD1Q96PB1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.17■■□□□ 1.62
CASD1Q96PB1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.17■■□□□ 1.62
CASD1Q96PB1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CASD1Q96PB1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASD1Q96PB1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASD1Q96PB1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CASD1Q96PB1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CASD1Q96PB1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CASD1Q96PB1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CASD1Q96PB1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASD1Q96PB1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.15■■□□□ 1.62
CASD1Q96PB1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASD1Q96PB1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.15■■□□□ 1.62
CASD1Q96PB1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.15■■□□□ 1.62
CASD1Q96PB1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CASD1Q96PB1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CASD1Q96PB1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASD1Q96PB1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASD1Q96PB1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.14■■□□□ 1.62
CASD1Q96PB1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CASD1Q96PB1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASD1Q96PB1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.14■■□□□ 1.61
CASD1Q96PB1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CASD1Q96PB1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASD1Q96PB1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASD1Q96PB1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.13■■□□□ 1.61
CASD1Q96PB1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CASD1Q96PB1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASD1Q96PB1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASD1Q96PB1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CASD1Q96PB1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASD1Q96PB1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.12■■□□□ 1.61
CASD1Q96PB1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.12■■□□□ 1.61
CASD1Q96PB1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.12■■□□□ 1.61
CASD1Q96PB1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASD1Q96PB1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CASD1Q96PB1 AC092803.2-201ENST00000564287 1899 ntBASIC25.11■■□□□ 1.61
CASD1Q96PB1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASD1Q96PB1 AC004448.1-201ENST00000458332 883 ntBASIC25.11■■□□□ 1.61
CASD1Q96PB1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.11■■□□□ 1.61
CASD1Q96PB1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.11■■□□□ 1.61
CASD1Q96PB1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASD1Q96PB1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.1■■□□□ 1.61
CASD1Q96PB1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.1■■□□□ 1.61
CASD1Q96PB1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASD1Q96PB1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.1■■□□□ 1.61
CASD1Q96PB1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.1■■□□□ 1.61
CASD1Q96PB1 AC106739.1-201ENST00000617035 715 ntBASIC25.1■■□□□ 1.61
CASD1Q96PB1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms