Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CDCA5Q96FF9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CDCA5Q96FF9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.79■■■□□ 2.04
CDCA5Q96FF9 AC091305.1-201ENST00000479476 895 ntBASIC27.79■■■□□ 2.04
CDCA5Q96FF9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDCA5Q96FF9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CDCA5Q96FF9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDCA5Q96FF9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CDCA5Q96FF9 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.78■■■□□ 2.04
CDCA5Q96FF9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CDCA5Q96FF9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CDCA5Q96FF9 AC139426.1-201ENST00000568218 2529 ntBASIC27.77■■■□□ 2.04
CDCA5Q96FF9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.04
CDCA5Q96FF9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.76■■■□□ 2.03
CDCA5Q96FF9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CDCA5Q96FF9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CDCA5Q96FF9 DUX4L19-201ENST00000557448 1267 ntBASIC27.76■■■□□ 2.03
CDCA5Q96FF9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CDCA5Q96FF9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.75■■■□□ 2.03
CDCA5Q96FF9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CDCA5Q96FF9 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.75■■■□□ 2.03
CDCA5Q96FF9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 AC004448.1-201ENST00000458332 883 ntBASIC27.74■■■□□ 2.03
CDCA5Q96FF9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.74■■■□□ 2.03
CDCA5Q96FF9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 MIR4767-201ENST00000582827 78 ntBASIC27.73■■■□□ 2.03
CDCA5Q96FF9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.73■■■□□ 2.03
CDCA5Q96FF9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CDCA5Q96FF9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDCA5Q96FF9 CA15P2-201ENST00000611168 834 ntBASIC27.72■■■□□ 2.03
CDCA5Q96FF9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CDCA5Q96FF9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDCA5Q96FF9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDCA5Q96FF9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDCA5Q96FF9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CDCA5Q96FF9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDCA5Q96FF9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.7■■■□□ 2.02
CDCA5Q96FF9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.7■■■□□ 2.02
CDCA5Q96FF9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 SYT6-210ENST00000641643 1587 ntBASIC27.69■■■□□ 2.02
CDCA5Q96FF9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDCA5Q96FF9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 RASA4CP-201ENST00000424092 1398 ntBASIC27.68■■■□□ 2.02
CDCA5Q96FF9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDCA5Q96FF9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDCA5Q96FF9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
CDCA5Q96FF9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CDCA5Q96FF9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.67■■■□□ 2.02
CDCA5Q96FF9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CDCA5Q96FF9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.66■■■□□ 2.02
CDCA5Q96FF9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
CDCA5Q96FF9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CDCA5Q96FF9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.65■■■□□ 2.02
CDCA5Q96FF9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.65■■■□□ 2.02
CDCA5Q96FF9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.64■■■□□ 2.02
CDCA5Q96FF9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CDCA5Q96FF9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDCA5Q96FF9 SERBP1P1-201ENST00000396021 1160 ntBASIC27.63■■■□□ 2.01
CDCA5Q96FF9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CDCA5Q96FF9 AC005703.6-201ENST00000623265 1329 ntBASIC27.63■■■□□ 2.01
CDCA5Q96FF9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
CDCA5Q96FF9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDCA5Q96FF9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDCA5Q96FF9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CDCA5Q96FF9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms