Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 KRT18P24-201ENST00000344739 1156 ntBASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CTHRC1Q96CG8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTHRC1Q96CG8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.07
CTHRC1Q96CG8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
CTHRC1Q96CG8 HLA-L-211ENST00000482052 1765 ntBASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 AC120024.1-201ENST00000562672 995 ntBASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.75■■□□□ 1.07
CTHRC1Q96CG8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTHRC1Q96CG8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTHRC1Q96CG8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTHRC1Q96CG8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTHRC1Q96CG8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 YBX1P4-201ENST00000392794 808 ntBASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 KRT8P33-201ENST00000508125 1423 ntBASIC21.72■■□□□ 1.07
CTHRC1Q96CG8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 AC103724.3-201ENST00000564481 992 ntBASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.71■■□□□ 1.07
CTHRC1Q96CG8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTHRC1Q96CG8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 THA1P-201ENST00000590384 1145 ntBASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 LINC00543-201ENST00000567234 1845 ntBASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CTHRC1Q96CG8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 LINC01124-201ENST00000409786 2117 ntBASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTHRC1Q96CG8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CTHRC1Q96CG8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTHRC1Q96CG8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTHRC1Q96CG8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.66■■□□□ 1.06
CTHRC1Q96CG8 MIR4281-201ENST00000580852 62 ntBASIC21.66■■□□□ 1.06
CTHRC1Q96CG8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms