Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 BX664725.1-201ENST00000438252 379 ntBASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 AC131212.1-201ENST00000613771 668 ntBASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSMEM1Q8WWF3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSMEM1Q8WWF3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSMEM1Q8WWF3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 AL356441.2-201ENST00000443009 864 ntBASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSMEM1Q8WWF3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
SSMEM1Q8WWF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 AL592295.1-201ENST00000400984 884 ntBASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SSMEM1Q8WWF3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.13■□□□□ 0.65
SSMEM1Q8WWF3 AC142381.3-201ENST00000568208 1670 ntBASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSMEM1Q8WWF3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 AC120024.1-201ENST00000562672 995 ntBASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSMEM1Q8WWF3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 MIR4787-201ENST00000607364 84 ntBASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSMEM1Q8WWF3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SSMEM1Q8WWF3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSMEM1Q8WWF3 AC096887.2-201ENST00000623443 1957 ntBASIC19.08■□□□□ 0.65
SSMEM1Q8WWF3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms