Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 MIR6724-1-201ENST00000616420 92 ntBASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 MIR6724-2-201ENST00000616483 92 ntBASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 MIR6724-4-201ENST00000617390 92 ntBASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 MIR6724-3-201ENST00000622482 92 ntBASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHKBP1Q8TBC3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.58■■□□□ 1.53
SHKBP1Q8TBC3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
SHKBP1Q8TBC3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SHKBP1Q8TBC3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SHKBP1Q8TBC3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SHKBP1Q8TBC3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SHKBP1Q8TBC3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SHKBP1Q8TBC3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHKBP1Q8TBC3 MIR3621-201ENST00000580529 85 ntBASIC24.57■■□□□ 1.52
SHKBP1Q8TBC3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHKBP1Q8TBC3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.56■■□□□ 1.52
SHKBP1Q8TBC3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHKBP1Q8TBC3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
SHKBP1Q8TBC3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.53■■□□□ 1.52
SHKBP1Q8TBC3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHKBP1Q8TBC3 AC097639.1-201ENST00000565519 1891 ntBASIC24.52■■□□□ 1.52
SHKBP1Q8TBC3 AL136116.3-201ENST00000402907 1138 ntBASIC24.52■■□□□ 1.52
SHKBP1Q8TBC3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHKBP1Q8TBC3 AC090877.2-201ENST00000558441 1738 ntBASIC24.52■■□□□ 1.52
SHKBP1Q8TBC3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SHKBP1Q8TBC3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SHKBP1Q8TBC3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.51■■□□□ 1.51
SHKBP1Q8TBC3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
SHKBP1Q8TBC3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
SHKBP1Q8TBC3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 AL356740.2-201ENST00000601559 647 ntBASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHKBP1Q8TBC3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHKBP1Q8TBC3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 MIR638-201ENST00000385237 100 ntBASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SHKBP1Q8TBC3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.47■■□□□ 1.51
SHKBP1Q8TBC3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms