Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SNIP1Q8TAD8 AC004448.1-201ENST00000458332 883 ntBASIC22.11■■□□□ 1.13
SNIP1Q8TAD8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SNIP1Q8TAD8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
SNIP1Q8TAD8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SNIP1Q8TAD8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 LINC01003-201ENST00000564834 1764 ntBASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SNIP1Q8TAD8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SNIP1Q8TAD8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.08■■□□□ 1.13
SNIP1Q8TAD8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.13
SNIP1Q8TAD8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SNIP1Q8TAD8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.08■■□□□ 1.13
SNIP1Q8TAD8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SNIP1Q8TAD8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SNIP1Q8TAD8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SNIP1Q8TAD8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 DRD5P2-201ENST00000421395 2012 ntBASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SNIP1Q8TAD8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SNIP1Q8TAD8 RASA4CP-201ENST00000424092 1398 ntBASIC22.04■■□□□ 1.12
SNIP1Q8TAD8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNIP1Q8TAD8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNIP1Q8TAD8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNIP1Q8TAD8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 AC092171.4-201ENST00000609130 632 ntBASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 CA15P2-201ENST00000611168 834 ntBASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNIP1Q8TAD8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 MIR4767-201ENST00000582827 78 ntBASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.02■■□□□ 1.12
SNIP1Q8TAD8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.02■■□□□ 1.11
SNIP1Q8TAD8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 SYT6-210ENST00000641643 1587 ntBASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 FOXO3B-201ENST00000395675 1928 ntBASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNIP1Q8TAD8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNIP1Q8TAD8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22■■□□□ 1.11
SNIP1Q8TAD8 AC027682.1-201ENST00000562846 899 ntBASIC22■■□□□ 1.11
SNIP1Q8TAD8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22■■□□□ 1.11
SNIP1Q8TAD8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22■■□□□ 1.11
SNIP1Q8TAD8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22■■□□□ 1.11
SNIP1Q8TAD8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms