Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 HLA-L-211ENST00000482052 1765 ntBASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHOXF1Q8NHV9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHOXF1Q8NHV9 AL117328.2-201ENST00000624617 1940 ntBASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RHOXF1Q8NHV9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 AC126177.7-201ENST00000547904 679 ntBASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.16■□□□□ 0.98
RHOXF1Q8NHV9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 DUX4L11-201ENST00000611504 1267 ntBASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 DUX4L12-201ENST00000614593 1267 ntBASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 DUX4L14-201ENST00000621227 1267 ntBASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOXF1Q8NHV9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.14■□□□□ 0.98
RHOXF1Q8NHV9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RHOXF1Q8NHV9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOXF1Q8NHV9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RHOXF1Q8NHV9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.11■□□□□ 0.97
RHOXF1Q8NHV9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms