Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRPV1Q8NER1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRPV1Q8NER1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TRPV1Q8NER1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 EDA-201ENST00000338901 1233 ntBASIC26.41■■□□□ 1.82
TRPV1Q8NER1 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 SRD5A1P1-201ENST00000442297 786 ntBASIC26.41■■□□□ 1.82
TRPV1Q8NER1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 AL355001.2-201ENST00000620617 1191 ntBASIC26.41■■□□□ 1.82
TRPV1Q8NER1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRPV1Q8NER1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRPV1Q8NER1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRPV1Q8NER1 AL136967.2-201ENST00000623968 743 ntBASIC26.39■■□□□ 1.82
TRPV1Q8NER1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.39■■□□□ 1.81
TRPV1Q8NER1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.38■■□□□ 1.81
TRPV1Q8NER1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.38■■□□□ 1.81
TRPV1Q8NER1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
TRPV1Q8NER1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRPV1Q8NER1 AC142086.6-201ENST00000621154 1765 ntBASIC26.38■■□□□ 1.81
TRPV1Q8NER1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 AC105265.2-201ENST00000467189 838 ntBASIC26.37■■□□□ 1.81
TRPV1Q8NER1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRPV1Q8NER1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRPV1Q8NER1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.36■■□□□ 1.81
TRPV1Q8NER1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRPV1Q8NER1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRPV1Q8NER1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
TRPV1Q8NER1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRPV1Q8NER1 AF213884.3-201ENST00000563833 479 ntBASIC26.35■■□□□ 1.81
TRPV1Q8NER1 MIR5787-201ENST00000611784 55 ntBASIC26.35■■□□□ 1.81
TRPV1Q8NER1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRPV1Q8NER1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRPV1Q8NER1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.34■■□□□ 1.81
TRPV1Q8NER1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRPV1Q8NER1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.34■■□□□ 1.81
TRPV1Q8NER1 AC104564.3-201ENST00000582367 638 ntBASIC26.34■■□□□ 1.81
TRPV1Q8NER1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRPV1Q8NER1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRPV1Q8NER1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.33■■□□□ 1.81
TRPV1Q8NER1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.33■■□□□ 1.81
TRPV1Q8NER1 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.33■■□□□ 1.81
TRPV1Q8NER1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRPV1Q8NER1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.33■■□□□ 1.81
TRPV1Q8NER1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TRPV1Q8NER1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.33■■□□□ 1.8
TRPV1Q8NER1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRPV1Q8NER1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRPV1Q8NER1 AC096887.2-201ENST00000623443 1957 ntBASIC26.31■■□□□ 1.8
TRPV1Q8NER1 MIR939-201ENST00000401314 82 ntBASIC26.31■■□□□ 1.8
TRPV1Q8NER1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRPV1Q8NER1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRPV1Q8NER1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRPV1Q8NER1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 AP001330.3-201ENST00000520123 633 ntBASIC26.3■■□□□ 1.8
TRPV1Q8NER1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRPV1Q8NER1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 AC004448.1-201ENST00000458332 883 ntBASIC26.29■■□□□ 1.8
TRPV1Q8NER1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TRPV1Q8NER1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.28■■□□□ 1.8
TRPV1Q8NER1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.28■■□□□ 1.8
TRPV1Q8NER1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms