Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PNMA1Q8ND90 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.31■■□□□ 1.96
PNMA1Q8ND90 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.31■■□□□ 1.96
PNMA1Q8ND90 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PNMA1Q8ND90 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
PNMA1Q8ND90 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 AF131216.4-201ENST00000638924 1588 ntBASIC27.3■■□□□ 1.96
PNMA1Q8ND90 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
PNMA1Q8ND90 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 AC022211.4-201ENST00000625094 2161 ntBASIC27.29■■□□□ 1.96
PNMA1Q8ND90 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 GUSBP5-201ENST00000418136 578 ntBASIC27.29■■□□□ 1.96
PNMA1Q8ND90 KRT125P-201ENST00000546827 989 ntBASIC27.29■■□□□ 1.96
PNMA1Q8ND90 AC021242.3-201ENST00000607598 1377 ntBASIC27.29■■□□□ 1.96
PNMA1Q8ND90 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.29■■□□□ 1.96
PNMA1Q8ND90 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.28■■□□□ 1.96
PNMA1Q8ND90 AC020928.2-201ENST00000588717 2197 ntBASIC27.28■■□□□ 1.96
PNMA1Q8ND90 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.28■■□□□ 1.96
PNMA1Q8ND90 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PNMA1Q8ND90 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PNMA1Q8ND90 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 MIR4787-201ENST00000607364 84 ntBASIC27.27■■□□□ 1.96
PNMA1Q8ND90 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
PNMA1Q8ND90 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PNMA1Q8ND90 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
PNMA1Q8ND90 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PNMA1Q8ND90 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PNMA1Q8ND90 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PNMA1Q8ND90 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PNMA1Q8ND90 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
PNMA1Q8ND90 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PNMA1Q8ND90 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.24■■□□□ 1.95
PNMA1Q8ND90 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.24■■□□□ 1.95
PNMA1Q8ND90 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PNMA1Q8ND90 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PNMA1Q8ND90 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.23■■□□□ 1.95
PNMA1Q8ND90 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.22■■□□□ 1.95
PNMA1Q8ND90 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.21■■□□□ 1.95
PNMA1Q8ND90 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PNMA1Q8ND90 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.21■■□□□ 1.95
PNMA1Q8ND90 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PNMA1Q8ND90 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PNMA1Q8ND90 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PNMA1Q8ND90 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PNMA1Q8ND90 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.2■■□□□ 1.94
PNMA1Q8ND90 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PNMA1Q8ND90 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PNMA1Q8ND90 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PNMA1Q8ND90 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PNMA1Q8ND90 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PNMA1Q8ND90 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PNMA1Q8ND90 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.18■■□□□ 1.94
PNMA1Q8ND90 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PNMA1Q8ND90 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PNMA1Q8ND90 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PNMA1Q8ND90 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PNMA1Q8ND90 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.17■■□□□ 1.94
PNMA1Q8ND90 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms