Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMRP1Q8NCR6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.5■■□□□ 1.51
SMRP1Q8NCR6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.49■■□□□ 1.51
SMRP1Q8NCR6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMRP1Q8NCR6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMRP1Q8NCR6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.48■■□□□ 1.51
SMRP1Q8NCR6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.48■■□□□ 1.51
SMRP1Q8NCR6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.47■■□□□ 1.51
SMRP1Q8NCR6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMRP1Q8NCR6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMRP1Q8NCR6 MIR4767-201ENST00000582827 78 ntBASIC24.47■■□□□ 1.51
SMRP1Q8NCR6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 SYT6-210ENST00000641643 1587 ntBASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMRP1Q8NCR6 RASA4CP-201ENST00000424092 1398 ntBASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 CA15P2-201ENST00000611168 834 ntBASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMRP1Q8NCR6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SMRP1Q8NCR6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMRP1Q8NCR6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMRP1Q8NCR6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.44■■□□□ 1.5
SMRP1Q8NCR6 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.44■■□□□ 1.5
SMRP1Q8NCR6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 AC092171.4-201ENST00000609130 632 ntBASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SMRP1Q8NCR6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMRP1Q8NCR6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 AC027682.1-201ENST00000562846 899 ntBASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMRP1Q8NCR6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMRP1Q8NCR6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMRP1Q8NCR6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMRP1Q8NCR6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.4■■□□□ 1.5
SMRP1Q8NCR6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
SMRP1Q8NCR6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMRP1Q8NCR6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.39■■□□□ 1.49
SMRP1Q8NCR6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMRP1Q8NCR6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMRP1Q8NCR6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMRP1Q8NCR6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.38■■□□□ 1.49
SMRP1Q8NCR6 AC005703.6-201ENST00000623265 1329 ntBASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 SERBP1P1-201ENST00000396021 1160 ntBASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMRP1Q8NCR6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.36■■□□□ 1.49
SMRP1Q8NCR6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SMRP1Q8NCR6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMRP1Q8NCR6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMRP1Q8NCR6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 IRS3P-201ENST00000223076 1006 ntBASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMRP1Q8NCR6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.34■■□□□ 1.49
SMRP1Q8NCR6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms