Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CROCCP3Q8IVE0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CROCCP3Q8IVE0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.08■□□□□ 0.97
CROCCP3Q8IVE0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.08■□□□□ 0.97
CROCCP3Q8IVE0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CROCCP3Q8IVE0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CROCCP3Q8IVE0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CROCCP3Q8IVE0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CROCCP3Q8IVE0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CROCCP3Q8IVE0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CROCCP3Q8IVE0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CROCCP3Q8IVE0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CROCCP3Q8IVE0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 AC110285.7-201ENST00000624417 1536 ntBASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CROCCP3Q8IVE0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CROCCP3Q8IVE0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CROCCP3Q8IVE0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 AC005559.1-201ENST00000589661 871 ntBASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.01■□□□□ 0.95
CROCCP3Q8IVE0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21■□□□□ 0.95
CROCCP3Q8IVE0 AC004812.2-201ENST00000611079 2094 ntBASIC21■□□□□ 0.95
CROCCP3Q8IVE0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CROCCP3Q8IVE0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21■□□□□ 0.95
CROCCP3Q8IVE0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21■□□□□ 0.95
CROCCP3Q8IVE0 MIR6090-201ENST00000622481 60 ntBASIC21■□□□□ 0.95
CROCCP3Q8IVE0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21■□□□□ 0.95
CROCCP3Q8IVE0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms