Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MRPL55Q7Z7F7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 MIR6089-201ENST00000616698 64 ntBASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC14.89□□□□□ -0.03
MRPL55Q7Z7F7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 RNF126P1-201ENST00000567452 1320 ntBASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MRPL55Q7Z7F7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 AC141586.4-201ENST00000624558 1573 ntBASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 AC133552.2-201ENST00000619106 1032 ntBASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 LINC00543-201ENST00000567234 1845 ntBASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MRPL55Q7Z7F7 FOXO3B-201ENST00000395675 1928 ntBASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MRPL55Q7Z7F7 AC009831.1-201ENST00000580420 1582 ntBASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MRPL55Q7Z7F7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MRPL55Q7Z7F7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MRPL55Q7Z7F7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.83□□□□□ -0.03
MRPL55Q7Z7F7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MRPL55Q7Z7F7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MRPL55Q7Z7F7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms