Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
UBE3BQ7Z3V4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.32■■■□□ 2.28
UBE3BQ7Z3V4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 AC010997.5-201ENST00000609182 354 ntBASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
UBE3BQ7Z3V4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
UBE3BQ7Z3V4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
UBE3BQ7Z3V4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
UBE3BQ7Z3V4 MTDHP2-201ENST00000601468 714 ntBASIC29.29■■■□□ 2.28
UBE3BQ7Z3V4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
UBE3BQ7Z3V4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
UBE3BQ7Z3V4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
UBE3BQ7Z3V4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.28■■■□□ 2.28
UBE3BQ7Z3V4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.27■■■□□ 2.28
UBE3BQ7Z3V4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.27■■■□□ 2.28
UBE3BQ7Z3V4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
UBE3BQ7Z3V4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
UBE3BQ7Z3V4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.26■■■□□ 2.27
UBE3BQ7Z3V4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.26■■■□□ 2.27
UBE3BQ7Z3V4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.26■■■□□ 2.27
UBE3BQ7Z3V4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.25■■■□□ 2.27
UBE3BQ7Z3V4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.25■■■□□ 2.27
UBE3BQ7Z3V4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
UBE3BQ7Z3V4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
UBE3BQ7Z3V4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.24■■■□□ 2.27
UBE3BQ7Z3V4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
UBE3BQ7Z3V4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.23■■■□□ 2.27
UBE3BQ7Z3V4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
UBE3BQ7Z3V4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
UBE3BQ7Z3V4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
UBE3BQ7Z3V4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
UBE3BQ7Z3V4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.22■■■□□ 2.27
UBE3BQ7Z3V4 SNX5-217ENST00000606557 1087 ntBASIC29.22■■■□□ 2.27
UBE3BQ7Z3V4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
UBE3BQ7Z3V4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
UBE3BQ7Z3V4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.21■■■□□ 2.27
UBE3BQ7Z3V4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.21■■■□□ 2.27
UBE3BQ7Z3V4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 MIR6724-1-201ENST00000616420 92 ntBASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 MIR6724-2-201ENST00000616483 92 ntBASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 MIR6724-4-201ENST00000617390 92 ntBASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 MIR6724-3-201ENST00000622482 92 ntBASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
UBE3BQ7Z3V4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
UBE3BQ7Z3V4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
UBE3BQ7Z3V4 AL117332.1-201ENST00000622628 974 ntBASIC29.19■■■□□ 2.26
UBE3BQ7Z3V4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
UBE3BQ7Z3V4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
UBE3BQ7Z3V4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 AC008406.3-201ENST00000620001 1374 ntBASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
UBE3BQ7Z3V4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 MIR6089-201ENST00000616698 64 ntBASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
UBE3BQ7Z3V4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
UBE3BQ7Z3V4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.16■■■□□ 2.26
UBE3BQ7Z3V4 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.16■■■□□ 2.26
UBE3BQ7Z3V4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms