Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHMP1BQ7LBR1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 AC010501.1-201ENST00000606270 1962 ntBASIC21.28■■□□□ 1
CHMP1BQ7LBR1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP1BQ7LBR1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP1BQ7LBR1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.27■□□□□ 0.99
CHMP1BQ7LBR1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 THA1P-201ENST00000590384 1145 ntBASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 AL035685.1-201ENST00000636663 812 ntBASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP1BQ7LBR1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 AC097639.1-201ENST00000565519 1891 ntBASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP1BQ7LBR1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 AC009299.2-201ENST00000482477 511 ntBASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP1BQ7LBR1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP1BQ7LBR1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 KRT18P24-201ENST00000344739 1156 ntBASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP1BQ7LBR1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 AC096887.2-201ENST00000623443 1957 ntBASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP1BQ7LBR1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHMP1BQ7LBR1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP1BQ7LBR1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP1BQ7LBR1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP1BQ7LBR1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP1BQ7LBR1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms