Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 AC127502.1-201ENST00000399971 1502 ntBASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM88Q6PEY1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TMEM88Q6PEY1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM88Q6PEY1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM88Q6PEY1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM88Q6PEY1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM88Q6PEY1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM88Q6PEY1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM88Q6PEY1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM88Q6PEY1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TMEM88Q6PEY1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88Q6PEY1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM88Q6PEY1 AP003733.4-201ENST00000623785 1697 ntBASIC18.64■□□□□ 0.57
TMEM88Q6PEY1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88Q6PEY1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM88Q6PEY1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM88Q6PEY1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM88Q6PEY1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms