Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CDKAL1Q5VV42 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDKAL1Q5VV42 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 AC068473.5-201ENST00000616428 2072 ntBASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDKAL1Q5VV42 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDKAL1Q5VV42 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CDKAL1Q5VV42 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CDKAL1Q5VV42 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDKAL1Q5VV42 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDKAL1Q5VV42 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDKAL1Q5VV42 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 DUSP8P5-201ENST00000422884 1815 ntBASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 AC012676.1-201ENST00000574705 1949 ntBASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 AC009831.1-201ENST00000580420 1582 ntBASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDKAL1Q5VV42 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CDKAL1Q5VV42 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.61■■□□□ 1.69
CDKAL1Q5VV42 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDKAL1Q5VV42 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CDKAL1Q5VV42 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDKAL1Q5VV42 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CDKAL1Q5VV42 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDKAL1Q5VV42 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDKAL1Q5VV42 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.57■■□□□ 1.68
CDKAL1Q5VV42 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDKAL1Q5VV42 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDKAL1Q5VV42 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.55■■□□□ 1.68
CDKAL1Q5VV42 AC133552.2-201ENST00000619106 1032 ntBASIC25.55■■□□□ 1.68
CDKAL1Q5VV42 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDKAL1Q5VV42 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDKAL1Q5VV42 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
CDKAL1Q5VV42 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDKAL1Q5VV42 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms